CDS

Accession Number TCMCG002C12718
gbkey CDS
Protein Id XP_020092401.1
Location complement(join(13162643..13162729,13162914..13163029,13164087..13164110,13164807..13164838,13164921..13165006,13165089..13165142,13165698..13165759,13165863..13165924,13166003..13166089,13166159..13166235,13167877..13167935,13168013..13168077,13168177..13168266,13168382..13168478,13168809..13168905,13168971..13169044,13169500..13169581,13169674..13169724,13171058..13171102,13171293..13171394,13171923..13172042,13174163..13174249,13174345..13174402,13174500..13174531,13174606..13174633,13174709..13174810,13175247..13175401,13176389..13176452,13177196..13177265,13177336..13177416,13178018..13178112,13178532..13178563,13180388..13180417))
Gene LOC109712960
GeneID 109712960
Organism Ananas comosus

Protein

Length 800aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA371634
db_source XM_020236812.1
Definition DNA mismatch repair protein MSH5 isoform X6 [Ananas comosus]

EGGNOG-MAPPER Annotation

COG_category L
Description ATPase domain of DNA mismatch repair MUTS family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08741        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000710        [VIEW IN EMBL-EBI]
GO:0000712        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0000795        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007129        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010777        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030983        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043073        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0045143        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051026        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051304        [VIEW IN EMBL-EBI]
GO:0051307        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070192        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0099086        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGGAGGAGGTCGAAGCCGAATCTCAGGTGTACATGGCCTGTGTAATGCAAGGTCATAGAGTTGGTGTTGCATACTATGACTCGAGTATCCATCAACTTTTTGTTTTAGAAGTTTGGGAAGATGGGAATGAGGAGTTTCCTCTGATTGACCTTGTGAAATATCAAGCAAAACCTATGACAATATACGCAAGCACTAAAACAGAAGAAGCACTTTTATCTGCATTACAACGAAATGATGGAGATGAAGTCACCGTAGTGAAGCTCATACGAAGTTCAATATTCAGCTATGAACAAGCTTGGCACAGACTGATATATCTAAGAGTTGCTGGGATGGATGAAGGCTTAGGTGTGAAGGAGAGAATTTGCTTCCTTAATTCTATGATGGATCTTGGAAGTGATGTCCAAGTTCGTGCTGCTGGAGGTCTCCTTGCTATATTAGAGAATGAGAGGCTTGTTGATATCTTTGAACAAAAGGACTGTGGAAACCCATCAATAGCAATAGATTGTGTGACTCAAATCTCATTAGACAAGTATCTAAAACTTGATGCAGCTGCACATGAGGCACTGCAGATTTTTCAGGTAGACAAGCACCCAAGTCACATGGGAATTGGAAGATCTAAGGAAGGATTTTCAGTCTTTGGAATGTTCAATAAGTGTGTCACACCTATGGGAAGGCGTCTGTTGAGGACCTGGTTCTTGAGACCAATACTTGATTGTGAAATTTTGAATAATCGCTTGGACACTATATCATTTTTTCTCTGCTGTGAAGAATTAATGTCTGCTTTACATGAGGCGTTGAAGTCAGTGAGAGACATTCATCACATGCTGAAGCCTACTGGAAATGGATTTTTAGAATTGGGAAAAGATTTATGCGAACTTTTGTTTTTCCTGAAGAAATTCAACTCTCCGAGTGCCTTCTGTACCAGCAGTGATTGGAACACATTTTTGAAGTGCGTTTGTTCCTTGTTGCATATAAACAAGATCATTGAAGTAGGAATACCTGAATACATTCAGGAGAGAATGGAATGCTCAAAGTTGGCCATACTCGAGAAGGCAAGTTCTTCTATTACGAATGAGATGGTTTATGTCTTTGATCTGTTGGATGAACTGCGAATGGTATATGAAGGATTGCCAGATTTTCTAGAGCAGGTGTCGTCTAATGAAATTGCTTCCCTTCCTTTCTTGAACGGGAGTAAAAGAGCTCCTTGCATTGTTTATGTCCATCAAATAGGATACTTGATGTGCATATTTGATGAGAAGCTAAGTGAAGACATGTTGGAGAAACTTAAAGATTTTGACTTTGCGTTTTCAGAAGATGGGGATGAGAAGAAGTTCTTCTATCATACTTCAAAGACTAGAGAATTGGACAATCTTCTTGGAGATATTTACCATAAAATTCTTGACATGGAGAGAGCAATTATTAGGGACCTGGTGTCTCGTGTGCTTCATTTCGCCCCACAACTAGTCAAGGCAGTGAACTTTGCAGCAGAACTTGATTGCTTTCTGTCATTGGCTCTAGTTGCTCGTCAGAACAATTACGTTCGACCCATCTTGACGGAGGATACCTTGCTTGATATAGAGAATGGGAGACATGCTTTGCAGGAAATGACGGTTGATACTTTTGTTCCAAATGATACAAAGATCTTTAACAATGGAAGAATAAACATCATAACTGGTCCAAACTACTCAGGAAAAAGCATTTATGTTAAACAGGTTGCTTTAGTGGTTTTTCTTTCCCATATTGGGAGTTTCGTACCTGCTGATTCTGCTATTGTCGGGATGACTGACAGGATTTTTTGCGCTATGGGAAGCAAACCAATGACAAGTGAACAATCAACTTTCATGATTGATCTGCATCAAGTTGGAATGATGCTGAGACATGCAACGTCAAGATCCTTATGTTTGTTGGATGAATTTGGCAAGGGTACTTTGACTGAAGATGGAGTTGGGCTTCTTGGAGGAACTATCAACTATTTTGCTAGCTATGATCATCCTCCAAAGGTCCTTTTGTGCACGCATTTGACAGAGATCTTTACTGAAAATTACTTACCGCAGTCTGAACATATCAAGTTTTACACTATGAGTGTGTTGAGACCTGACAGCAACTGCATGAGCGGTGAAGACGTCATTTTTCTTTACCGACTTGTACCTGGGCAAGCGCTTATGAGCTATGGCTTGCATTGTGCACGGCTTGCAGGGGTACCTGACGGTGTTGTTGAAAGGGCTACGGTTGTTTTAGAAGCTTTAAATTTTAAGAAGCCTATAAGCCGCTTAGATTCCCAGATACTATTGGCTAGAGACCAGCAGTACAAGGATGCTGTATCGAAAATGTTGGCTTTTGATGCATGCAAAGGTGATCTCAGCTCATTTTTTCAAGATATATTTCCGTTGGAAGCTTAG
Protein:  
MEEEVEAESQVYMACVMQGHRVGVAYYDSSIHQLFVLEVWEDGNEEFPLIDLVKYQAKPMTIYASTKTEEALLSALQRNDGDEVTVVKLIRSSIFSYEQAWHRLIYLRVAGMDEGLGVKERICFLNSMMDLGSDVQVRAAGGLLAILENERLVDIFEQKDCGNPSIAIDCVTQISLDKYLKLDAAAHEALQIFQVDKHPSHMGIGRSKEGFSVFGMFNKCVTPMGRRLLRTWFLRPILDCEILNNRLDTISFFLCCEELMSALHEALKSVRDIHHMLKPTGNGFLELGKDLCELLFFLKKFNSPSAFCTSSDWNTFLKCVCSLLHINKIIEVGIPEYIQERMECSKLAILEKASSSITNEMVYVFDLLDELRMVYEGLPDFLEQVSSNEIASLPFLNGSKRAPCIVYVHQIGYLMCIFDEKLSEDMLEKLKDFDFAFSEDGDEKKFFYHTSKTRELDNLLGDIYHKILDMERAIIRDLVSRVLHFAPQLVKAVNFAAELDCFLSLALVARQNNYVRPILTEDTLLDIENGRHALQEMTVDTFVPNDTKIFNNGRINIITGPNYSGKSIYVKQVALVVFLSHIGSFVPADSAIVGMTDRIFCAMGSKPMTSEQSTFMIDLHQVGMMLRHATSRSLCLLDEFGKGTLTEDGVGLLGGTINYFASYDHPPKVLLCTHLTEIFTENYLPQSEHIKFYTMSVLRPDSNCMSGEDVIFLYRLVPGQALMSYGLHCARLAGVPDGVVERATVVLEALNFKKPISRLDSQILLARDQQYKDAVSKMLAFDACKGDLSSFFQDIFPLEA